| Ecosystem | Type | Status | Ref. |
|---|---|---|---|
| Agulhas Current | Sea/Bay/Gulf | native | 5213 |
| Arabian Sea | Sea/Bay/Gulf | native | 2872 |
| Atlantic Ocean | Sea/Bay/Gulf | native | 3968 |
| Chiku River | River (basin) | native | 36073 |
| Chilika Lake/Lagoon | Lagoon | native | 29108 |
| Erhjen River | River (basin) | native | 36073 |
| Gulf of Aden | Sea/Bay/Gulf | native | 5450 |
| Indian Ocean | Sea/Bay/Gulf | native | 3968 |
| Indonesian Sea | Sea/Bay/Gulf | native | 5978 |
| Pacific Ocean | Sea/Bay/Gulf | native | 11441 |
| Pagbilao Bay | Sea/Bay/Gulf | native | 11338 |
| Panguil Bay | Sea/Bay/Gulf | native | 47626 |
| Persian Gulf | Sea/Bay/Gulf | native | 68964 |
| Red Sea | Sea/Bay/Gulf | native | 84159 |
| Ruerhmen River | River (basin) | native | 36073 |
| San Miguel Bay | Sea/Bay/Gulf | native | 45161 |
| Shihtsao River | River (basin) | native | 36073 |
| Shiliao River | River (basin) | native | 36073 |
| Somali Coastal Current | Sea/Bay/Gulf | native | 12484 |
| South China Sea | Sea/Bay/Gulf | native | 36648 |
| Southern China | Sea/Bay/Gulf | native | 31075 |
| Sulu-Celebes Sea | Sea/Bay/Gulf | native | 2858 |
| Tsengwen River | River (basin) | native | 36073 |
| Yellow River (China) | River (basin) | native | 47439 |
| Yellow Sea | Sea/Bay/Gulf | native | 5193 |
| Zambezi | River (basin) | native | 39494 |