| Ökosysteme | Typ | Status | Ref. |
|---|---|---|---|
| Agnébi | River (basin) | misidentification | 272 |
| Albert | Lake | native | 42032 |
| Aruwimi | River (basin) | native | 42032 |
| Bangweulu | River (basin) | native | 52959 |
| Benue | River (basin) | misidentification | 51193 |
| Buzi | River (basin) | native | 94654 |
| Chad | River (basin) | misidentification | 367 |
| Chari-Logone | River (basin) | misidentification | 42032 |
| Chobe | River (basin) | native | 13337 |
| Comoé | River (basin) | misidentification | 272 |
| Congo | River (basin) | native | 42032 |
| Cross | River (basin) | native | 80290 |
| Ethiopian | Zoogeographic realm | endemic | 4743 |
| Incomati | River (basin) | native | 13332 |
| Itimbiri | River (basin) | native | 42032 |
| Kariba | Lake | native | 39194 |
| Kasai | River (basin) | native | 42032 |
| Komadugu Yobe | River (basin) | native | 42032 |
| Kouilou-Niari | River (basin) | native | 42032 |
| Kunene | River (basin) | native | 33857 |
| Kwando | River (basin) | native | 13337 |
| Kwilu | River (basin) | native | 42032 |
| Limpopo | River (basin) | native | 5331 |
| Lindi-Tshopo | River (basin) | native | 42032 |
| Lomami | River (basin) | native | 106245 |
| Lower Congo | River (basin) | native | 42510 |
| Lualaba | River (basin) | native | 42032 |
| Maputo | River (basin) | native | 7248 |
| Middle Congo | River (basin) | native | 42032 |
| Middle Niger | River (basin) | native | 42032 |
| Mweru | Lake | native | 13337 |
| Niger | River (basin) | misidentification | 367 |
| Nile | River (basin) | misidentification | 5331 |
| Okavango | River (basin) | native | 7248 |
| Pool Malebo | Lake | native | 41585 |
| Ruvuma | River (basin) | native | 4967 |
| Sabi | River (basin) | native | 94654 |
| Sanaga | River (basin) | native | 80290 |
| Sangha | River (basin) | native | 44840 |
| Sankuru | River (basin) | native | 42032 |
| Senegal | River (basin) | native | 42032 |
| Shire | River (basin) | native | 39192 |
| Tanganyika | Lake | native | 80290 |
| Tano | River (basin) | misidentification | 272 |
| Turkana | Lake | misidentification | 80290 |
| Ubangui | River (basin) | native | 42032 |
| Uélé | River (basin) | native | 42032 |
| Upper Lualaba | River (basin) | native | 42032 |
| Upper Niger | River (basin) | misidentification | 42032 |
| Wagenia Falls | River (basin) | native | 106245 |
| Wami | River (basin) | native | 4967 |
| Zambezi | River (basin) | native | 13337 |