| Ecosystem | Type | Status | Ref. |
|---|---|---|---|
| Albert | Lake | misidentification | 47311 |
| Chad | River (basin) | questionable | 3788 |
| Ethiopian | Zoogeographic realm | endemic | 3788 |
| Malagarazi | River (basin) | native | 47311 |
| Nile | River (basin) | native | 47311 |
| Nile Delta | River (basin) | extirpated | 47311 |
| Victoria | Lake | native | 47311 |
| White Nile | River (basin) | native | 47311 |