| Ecosystem | Type | Status | Ref. |
|---|---|---|---|
| Exmouth to Broome | Sea/Bay/Gulf | native | 75154 |
| Indian Ocean | Sea/Bay/Gulf | native | 1602 |
| Indonesian Sea | Sea/Bay/Gulf | native | 1602 |
| North Australian Shelf | Sea/Bay/Gulf | native | 1602 |
| Northeast Australian Shelf | Sea/Bay/Gulf | native | 1602 |
| Pacific Ocean | Sea/Bay/Gulf | native | 592 |
| Polynesian Waters | Sea/Bay/Gulf | native | 1602 |
| Rapa-Pitcairn | Sea/Bay/Gulf | native | 41650 |
| Shark Bay | Sea/Bay/Gulf | native | 75154 |
| South China Sea | Sea/Bay/Gulf | native | 36648 |
| Torres Strait Northern Great Barrier Reef | Sea/Bay/Gulf | native | 75154 |